Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Gm44335-201ENSMUST00000196879 141 ntBASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Gm44297-201ENSMUST00000198304 141 ntBASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Gm44346-201ENSMUST00000198851 141 ntBASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Gm25857-201ENSMUST00000082788 129 ntBASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col25a1Q99MQ5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col25a1Q99MQ5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.7■□□□□ 0.26
Col25a1Q99MQ5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Gm13186-201ENSMUST00000118031 316 ntBASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Gm27622-201ENSMUST00000183779 60 ntBASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Gm6007-201ENSMUST00000208170 823 ntBASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col25a1Q99MQ5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Phf7-203ENSMUST00000226565 1971 ntBASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms