Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Gm44450-201ENSMUST00000199528 114 ntBASIC14.14□□□□□ -0.15
Scrt1Q99M85 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.14□□□□□ -0.15
Scrt1Q99M85 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.14□□□□□ -0.15
Scrt1Q99M85 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scrt1Q99M85 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.14□□□□□ -0.15
Scrt1Q99M85 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scrt1Q99M85 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gm23935-201ENSMUST00000102303 57 ntBASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gm24270-201ENSMUST00000102326 57 ntBASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gm4995-201ENSMUST00000117247 432 ntBASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gm15467-201ENSMUST00000120582 445 ntBASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gm24245-201ENSMUST00000157318 57 ntBASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Mir5126-201ENSMUST00000175513 77 ntBASIC14.13□□□□□ -0.15
Scrt1Q99M85 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gm18421-201ENSMUST00000204122 625 ntBASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.13□□□□□ -0.15
Scrt1Q99M85 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scrt1Q99M85 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scrt1Q99M85 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Gm12260-201ENSMUST00000122447 411 ntBASIC14.12□□□□□ -0.15
Scrt1Q99M85 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms