Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd3Q99LE3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Lysmd3Q99LE3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lysmd3Q99LE3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd3Q99LE3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms