Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhga9Q91XX9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga9Q91XX9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga9Q91XX9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga9Q91XX9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga9Q91XX9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga9Q91XX9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhga9Q91XX9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga9Q91XX9 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga9Q91XX9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Olfr129-201ENSMUST00000122318 993 ntBASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhga9Q91XX9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga9Q91XX9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga9Q91XX9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga9Q91XX9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga9Q91XX9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga9Q91XX9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga9Q91XX9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga9Q91XX9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Pcdhga9Q91XX9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga9Q91XX9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms