Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhgc3Q91XX1 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Gm37856-201ENSMUST00000191634 999 ntBASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhgc3Q91XX1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Gm10517-202ENSMUST00000192970 758 ntBASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgc3Q91XX1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Gm27275-201ENSMUST00000184318 272 ntBASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Gm18025-201ENSMUST00000221733 862 ntBASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms