Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
H1fooQ8VIK3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Gm22697-201ENSMUST00000175194 63 ntBASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Gm18101-201ENSMUST00000215769 548 ntBASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H1fooQ8VIK3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Gm21559-201ENSMUST00000220638 855 ntBASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Gm8587-201ENSMUST00000076538 843 ntBASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H1fooQ8VIK3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms