Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TraipQ8VIG6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TraipQ8VIG6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm8825-201ENSMUST00000182565 998 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm4518-201ENSMUST00000182638 718 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm18206-201ENSMUST00000207027 926 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.14■□□□□ 0.33
TraipQ8VIG6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TraipQ8VIG6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.13■□□□□ 0.33
TraipQ8VIG6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Gm18622-201ENSMUST00000219361 595 ntBASIC17.13■□□□□ 0.33
TraipQ8VIG6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TraipQ8VIG6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.13■□□□□ 0.33
TraipQ8VIG6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TraipQ8VIG6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Gm7222-201ENSMUST00000117512 906 ntBASIC17.12■□□□□ 0.33
TraipQ8VIG6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.12■□□□□ 0.33
TraipQ8VIG6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Gm6550-201ENSMUST00000187574 993 ntBASIC17.12■□□□□ 0.33
TraipQ8VIG6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TraipQ8VIG6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms