Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.74■□□□□ 0.27
Trim60Q8VI40 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim60Q8VI40 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.74■□□□□ 0.27
Trim60Q8VI40 Gm7213-201ENSMUST00000215977 950 ntBASIC16.74■□□□□ 0.27
Trim60Q8VI40 Gm30025-201ENSMUST00000218555 728 ntBASIC16.74■□□□□ 0.27
Trim60Q8VI40 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim60Q8VI40 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.73■□□□□ 0.27
Trim60Q8VI40 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.73■□□□□ 0.27
Trim60Q8VI40 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim60Q8VI40 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.73■□□□□ 0.27
Trim60Q8VI40 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim60Q8VI40 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim60Q8VI40 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.71■□□□□ 0.27
Trim60Q8VI40 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.71■□□□□ 0.27
Trim60Q8VI40 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim60Q8VI40 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.71■□□□□ 0.27
Trim60Q8VI40 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim60Q8VI40 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim60Q8VI40 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms