Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc65Q8VHI7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc65Q8VHI7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc65Q8VHI7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc65Q8VHI7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Ccdc65Q8VHI7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc65Q8VHI7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.08■□□□□ 0.33
Ccdc65Q8VHI7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc65Q8VHI7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc65Q8VHI7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Ccdc65Q8VHI7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Gm9013-201ENSMUST00000132939 882 ntBASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc65Q8VHI7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc65Q8VHI7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ccdc65Q8VHI7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms