Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Gm15372-201ENSMUST00000120729 834 ntBASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Rprl3-201ENSMUST00000157400 290 ntBASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Gm28659-201ENSMUST00000188013 759 ntBASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Gm5864-201ENSMUST00000202263 970 ntBASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Mzt1-203ENSMUST00000227948 952 ntBASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndc1Q8VCB1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndc1Q8VCB1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Gm12644-201ENSMUST00000119935 606 ntBASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Mir8098-201ENSMUST00000184011 137 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms