Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Vps39Q8R5L3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps39Q8R5L3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps39Q8R5L3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps39Q8R5L3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Vps39Q8R5L3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps39Q8R5L3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Vps39Q8R5L3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.21■□□□□ 0.18
Vps39Q8R5L3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps39Q8R5L3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vps39Q8R5L3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Vps39Q8R5L3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms