Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Mir6404-201ENSMUST00000183699 94 ntBASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Gm43347-201ENSMUST00000200226 580 ntBASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Rpp40Q8R1F9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp40Q8R1F9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Gm25406-201ENSMUST00000157599 105 ntBASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp40Q8R1F9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpp40Q8R1F9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rpp40Q8R1F9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rpp40Q8R1F9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpp40Q8R1F9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rpp40Q8R1F9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Gm7506-201ENSMUST00000207758 815 ntBASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms