Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.19□□□□□ -0.78
Cystm1Q8K353 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Mir1199-201ENSMUST00000117015 119 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 Gm11927-201ENSMUST00000118472 759 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 Gm29241-201ENSMUST00000189260 1096 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 Gm10138-203ENSMUST00000206952 366 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 Zfp783-201ENSMUST00000095946 670 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.18□□□□□ -0.78
Cystm1Q8K353 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cystm1Q8K353 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.17□□□□□ -0.78
Cystm1Q8K353 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cystm1Q8K353 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms