Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm45328-201ENSMUST00000210942 917 ntBASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfwd3Q8CIK8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfwd3Q8CIK8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfwd3Q8CIK8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfwd3Q8CIK8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rfwd3Q8CIK8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.02
Rfwd3Q8CIK8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfwd3Q8CIK8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfwd3Q8CIK8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms