Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm22065-201ENSMUST00000103753 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm22066-201ENSMUST00000103761 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm24932-201ENSMUST00000103763 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm24115-201ENSMUST00000103799 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm22190-201ENSMUST00000103827 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm22191-201ENSMUST00000103831 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm24721-201ENSMUST00000103849 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm28018-201ENSMUST00000103869 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm26399-201ENSMUST00000103937 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm25349-201ENSMUST00000177728 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm23616-201ENSMUST00000177797 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm25871-201ENSMUST00000177816 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm24752-201ENSMUST00000178240 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm24496-201ENSMUST00000178287 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm25649-201ENSMUST00000178476 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm25548-201ENSMUST00000178681 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm23147-201ENSMUST00000178841 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm26095-201ENSMUST00000179270 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm22171-201ENSMUST00000179283 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm23936-201ENSMUST00000179354 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm22619-201ENSMUST00000179516 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm25255-201ENSMUST00000179579 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm24755-201ENSMUST00000179691 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm26506-201ENSMUST00000179692 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm25086-201ENSMUST00000179931 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm23243-201ENSMUST00000180047 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm24659-201ENSMUST00000180212 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm24169-201ENSMUST00000180244 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm23689-201ENSMUST00000180354 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm27359-201ENSMUST00000184153 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm27785-201ENSMUST00000184268 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm27466-201ENSMUST00000184396 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm27703-201ENSMUST00000184836 110 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rp1l1Q8CGM2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rp1l1Q8CGM2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Gm18889-201ENSMUST00000174284 929 ntBASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Gm9385-201ENSMUST00000117563 472 ntBASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rp1l1Q8CGM2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms