Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp1Q8C8C1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Gm44492-201ENSMUST00000197012 141 ntBASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp1Q8C8C1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp1Q8C8C1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Mir1895-201ENSMUST00000122615 79 ntBASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Gm27494-201ENSMUST00000184735 189 ntBASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Gm18622-201ENSMUST00000219361 595 ntBASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp1Q8C8C1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rtp1Q8C8C1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rtp1Q8C8C1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.33■□□□□ 0.53
Rtp1Q8C8C1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtp1Q8C8C1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Gm4899-201ENSMUST00000178708 719 ntBASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Gm5745-201ENSMUST00000183748 313 ntBASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp1Q8C8C1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms