Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Gm2213-201ENSMUST00000197485 688 ntBASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Gm14494-201ENSMUST00000118786 435 ntBASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Gm11764-201ENSMUST00000120221 623 ntBASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ccdc187Q8C5V8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.08■□□□□ 0.17
Ccdc187Q8C5V8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.08■□□□□ 0.17
Ccdc187Q8C5V8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc187Q8C5V8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc187Q8C5V8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc187Q8C5V8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Gm5682-201ENSMUST00000173402 505 ntBASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc187Q8C5V8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc187Q8C5V8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms