Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Gm10819-201ENSMUST00000099988 561 ntBASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc60Q8C4J0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc60Q8C4J0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc60Q8C4J0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc60Q8C4J0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc60Q8C4J0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc60Q8C4J0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc60Q8C4J0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc60Q8C4J0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc60Q8C4J0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc60Q8C4J0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc60Q8C4J0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms