Protein–RNA interactions for Protein: Q8C1M2

Znf428, Zinc finger protein 428, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf428Q8C1M2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Znf428Q8C1M2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Gm44335-201ENSMUST00000196879 141 ntBASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Gm44297-201ENSMUST00000198304 141 ntBASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Gm44346-201ENSMUST00000198851 141 ntBASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Znf428Q8C1M2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf428Q8C1M2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Gm13365-201ENSMUST00000121188 973 ntBASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf428Q8C1M2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf428Q8C1M2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.2■□□□□ 0.66
Znf428Q8C1M2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Znf428Q8C1M2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Znf428Q8C1M2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Znf428Q8C1M2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Znf428Q8C1M2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Znf428Q8C1M2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms