Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cps1Q8C196 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cps1Q8C196 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC21.63■■□□□ 1.05
Cps1Q8C196 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 Gm13127-201ENSMUST00000118978 1389 ntBASIC21.63■■□□□ 1.05
Cps1Q8C196 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cps1Q8C196 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC21.63■■□□□ 1.05
Cps1Q8C196 Gm13365-201ENSMUST00000121188 973 ntBASIC21.63■■□□□ 1.05
Cps1Q8C196 Gm25948-201ENSMUST00000175334 112 ntBASIC21.63■■□□□ 1.05
Cps1Q8C196 Gm27301-201ENSMUST00000184012 127 ntBASIC21.63■■□□□ 1.05
Cps1Q8C196 Gm18246-201ENSMUST00000221023 728 ntBASIC21.63■■□□□ 1.05
Cps1Q8C196 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cps1Q8C196 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Cps1Q8C196 Gm43474-201ENSMUST00000196415 774 ntBASIC21.62■■□□□ 1.05
Cps1Q8C196 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cps1Q8C196 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cps1Q8C196 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC21.62■■□□□ 1.05
Cps1Q8C196 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cps1Q8C196 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Gm6226-201ENSMUST00000117765 1146 ntBASIC21.61■■□□□ 1.05
Cps1Q8C196 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cps1Q8C196 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cps1Q8C196 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC21.6■■□□□ 1.05
Cps1Q8C196 Rpph1-201ENSMUST00000175096 319 ntBASIC21.6■■□□□ 1.05
Cps1Q8C196 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Cps1Q8C196 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cps1Q8C196 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cps1Q8C196 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cps1Q8C196 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cps1Q8C196 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cps1Q8C196 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cps1Q8C196 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cps1Q8C196 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cps1Q8C196 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC21.59■■□□□ 1.05
Cps1Q8C196 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC21.59■■□□□ 1.05
Cps1Q8C196 Gm20553-201ENSMUST00000204205 844 ntBASIC21.59■■□□□ 1.05
Cps1Q8C196 Gm5628-201ENSMUST00000222318 1049 ntBASIC21.59■■□□□ 1.05
Cps1Q8C196 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cps1Q8C196 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cps1Q8C196 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cps1Q8C196 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cps1Q8C196 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cps1Q8C196 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cps1Q8C196 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cps1Q8C196 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cps1Q8C196 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cps1Q8C196 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
Cps1Q8C196 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC21.58■■□□□ 1.04
Cps1Q8C196 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cps1Q8C196 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cps1Q8C196 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.57■■□□□ 1.04
Cps1Q8C196 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cps1Q8C196 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cps1Q8C196 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms