Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Gm33142-201ENSMUST00000193913 867 ntBASIC15.13■□□□□ 0.01
Cpne1Q8C166 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Gm45328-201ENSMUST00000210942 917 ntBASIC15.13■□□□□ 0.01
Cpne1Q8C166 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.13■□□□□ 0.01
Cpne1Q8C166 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne1Q8C166 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cpne1Q8C166 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.12■□□□□ 0.01
Cpne1Q8C166 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.12■□□□□ 0.01
Cpne1Q8C166 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cpne1Q8C166 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne1Q8C166 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.11■□□□□ 0.01
Cpne1Q8C166 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne1Q8C166 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.1■□□□□ 0.01
Cpne1Q8C166 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne1Q8C166 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.09■□□□□ 0.01
Cpne1Q8C166 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cpne1Q8C166 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
Cpne1Q8C166 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.09■□□□□ 0.01
Cpne1Q8C166 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpne1Q8C166 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpne1Q8C166 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpne1Q8C166 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms