Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm8587-201ENSMUST00000076538 843 ntBASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Gm27389-201ENSMUST00000183622 195 ntBASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trerf1Q8BXJ2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trerf1Q8BXJ2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 AA414768-201ENSMUST00000121924 1257 ntBASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Gm26039-201ENSMUST00000158152 144 ntBASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trerf1Q8BXJ2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Gm13186-201ENSMUST00000118031 316 ntBASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.03■□□□□ 0.32
Trerf1Q8BXJ2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms