Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2bQ8BJF9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp2bQ8BJF9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2bQ8BJF9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms