Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim6Q8BGE7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Timm23-208ENSMUST00000226683 750 ntBASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim6Q8BGE7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.19■□□□□ 0.34
Trim6Q8BGE7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim6Q8BGE7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim6Q8BGE7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms