Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krr1Q8BGA5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krr1Q8BGA5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Gm27463-201ENSMUST00000183569 57 ntBASIC15.31■□□□□ 0.04
Krr1Q8BGA5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krr1Q8BGA5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.3■□□□□ 0.04
Krr1Q8BGA5 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Krr1Q8BGA5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krr1Q8BGA5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms