Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atpaf1Q811I0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.25□□□□□ -0.29
Atpaf1Q811I0 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.25□□□□□ -0.29
Atpaf1Q811I0 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.25□□□□□ -0.29
Atpaf1Q811I0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Phf7-203ENSMUST00000226565 1971 ntBASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atpaf1Q811I0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atpaf1Q811I0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 BC037039-201ENSMUST00000192003 2205 ntBASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atpaf1Q811I0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms