Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Skida1Q80YR3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Skida1Q80YR3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Skida1Q80YR3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Skida1Q80YR3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Skida1Q80YR3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Skida1Q80YR3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.32■□□□□ 0.2
Skida1Q80YR3 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.31■□□□□ 0.2
Skida1Q80YR3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.31■□□□□ 0.2
Skida1Q80YR3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Gm42975-201ENSMUST00000200612 1491 ntBASIC16.31■□□□□ 0.2
Skida1Q80YR3 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Gm43489-201ENSMUST00000196810 993 ntBASIC16.31■□□□□ 0.2
Skida1Q80YR3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Skida1Q80YR3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Skida1Q80YR3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Gm42995-201ENSMUST00000197047 1330 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Gm7350-201ENSMUST00000120964 636 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Gm13792-201ENSMUST00000121350 423 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Skida1Q80YR3 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Gm4540-201ENSMUST00000170669 429 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Gm8480-201ENSMUST00000190350 698 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Trbv27-201ENSMUST00000193711 277 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 AC158392.1-201ENSMUST00000223720 1069 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 AC156574.1-201ENSMUST00000227084 452 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.3■□□□□ 0.2
Skida1Q80YR3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Skida1Q80YR3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.29■□□□□ 0.2
Skida1Q80YR3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Gm7370-201ENSMUST00000219471 767 ntBASIC16.29■□□□□ 0.2
Skida1Q80YR3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Gm20445-201ENSMUST00000061905 565 ntBASIC16.29■□□□□ 0.2
Skida1Q80YR3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Skida1Q80YR3 Gm43981-201ENSMUST00000203285 1467 ntBASIC16.29■□□□□ 0.2
Skida1Q80YR3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms