Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnrc18Q80WC3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.01■□□□□ 0.15
Tnrc18Q80WC3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnrc18Q80WC3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc18Q80WC3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnrc18Q80WC3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnrc18Q80WC3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnrc18Q80WC3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnrc18Q80WC3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Rpph1-201ENSMUST00000175096 319 ntBASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnrc18Q80WC3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tnrc18Q80WC3 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.96■□□□□ 0.14
Tnrc18Q80WC3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tnrc18Q80WC3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Tnrc18Q80WC3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.95■□□□□ 0.14
Tnrc18Q80WC3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnrc18Q80WC3 Gm18489-201ENSMUST00000172565 551 ntBASIC15.95■□□□□ 0.14
Tnrc18Q80WC3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tnrc18Q80WC3 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.95■□□□□ 0.14
Tnrc18Q80WC3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tnrc18Q80WC3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms