Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssx9Q6XAS3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Gm21559-201ENSMUST00000220638 855 ntBASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Gm8587-201ENSMUST00000076538 843 ntBASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssx9Q6XAS3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Gm6433-201ENSMUST00000118634 875 ntBASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Mir6982-201ENSMUST00000184354 68 ntBASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ssx9Q6XAS3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Gm22697-201ENSMUST00000175194 63 ntBASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Gm37722-201ENSMUST00000193757 208 ntBASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.1■□□□□ 0.17
Ssx9Q6XAS3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssx9Q6XAS3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms