Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.59□□□□□ -0.23
Rif1Q6PR54 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rif1Q6PR54 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rif1Q6PR54 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rif1Q6PR54 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rif1Q6PR54 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rif1Q6PR54 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.58□□□□□ -0.24
Rif1Q6PR54 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.58□□□□□ -0.24
Rif1Q6PR54 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.58□□□□□ -0.24
Rif1Q6PR54 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gm44450-201ENSMUST00000199528 114 ntBASIC13.58□□□□□ -0.24
Rif1Q6PR54 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gm15824-201ENSMUST00000119516 955 ntBASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Gm27618-201ENSMUST00000183671 60 ntBASIC13.58□□□□□ -0.24
Rif1Q6PR54 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rif1Q6PR54 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.57□□□□□ -0.24
Rif1Q6PR54 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rif1Q6PR54 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Rif1Q6PR54 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Gm13453-201ENSMUST00000118708 357 ntBASIC13.56□□□□□ -0.24
Rif1Q6PR54 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.56□□□□□ -0.24
Rif1Q6PR54 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.56□□□□□ -0.24
Rif1Q6PR54 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rif1Q6PR54 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Gm4899-201ENSMUST00000178708 719 ntBASIC13.55□□□□□ -0.24
Rif1Q6PR54 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms