Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Gm27867-201ENSMUST00000184778 125 ntBASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc46a1Q6PEM8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Slc46a1Q6PEM8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc46a1Q6PEM8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.21□□□□□ -0.14
Slc46a1Q6PEM8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Slc46a1Q6PEM8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc46a1Q6PEM8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc46a1Q6PEM8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a1Q6PEM8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Gm15165-201ENSMUST00000118140 502 ntBASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.18□□□□□ -0.14
Slc46a1Q6PEM8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Slc46a1Q6PEM8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a1Q6PEM8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a1Q6PEM8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a1Q6PEM8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms