Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd4Q6PDQ2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Gm18246-201ENSMUST00000221023 728 ntBASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd4Q6PDQ2 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.95■□□□□ 0.95
Chd4Q6PDQ2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Chd4Q6PDQ2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Gm19164-201ENSMUST00000210667 640 ntBASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd4Q6PDQ2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Gm44492-201ENSMUST00000197012 141 ntBASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Chd4Q6PDQ2 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms