Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm43767-201ENSMUST00000198933 381 ntBASIC17.43■□□□□ 0.38
ShbQ6PD21 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.43■□□□□ 0.38
ShbQ6PD21 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShbQ6PD21 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShbQ6PD21 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.43■□□□□ 0.38
ShbQ6PD21 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShbQ6PD21 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShbQ6PD21 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ShbQ6PD21 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShbQ6PD21 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShbQ6PD21 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ShbQ6PD21 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
ShbQ6PD21 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.42■□□□□ 0.38
ShbQ6PD21 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.42■□□□□ 0.38
ShbQ6PD21 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
ShbQ6PD21 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Gm7774-201ENSMUST00000200064 533 ntBASIC17.42■□□□□ 0.38
ShbQ6PD21 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ShbQ6PD21 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.42■□□□□ 0.38
ShbQ6PD21 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ShbQ6PD21 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.42■□□□□ 0.38
ShbQ6PD21 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.42■□□□□ 0.38
ShbQ6PD21 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShbQ6PD21 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.41■□□□□ 0.38
ShbQ6PD21 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.41■□□□□ 0.38
ShbQ6PD21 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ShbQ6PD21 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShbQ6PD21 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ShbQ6PD21 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShbQ6PD21 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Gm5866-201ENSMUST00000177881 973 ntBASIC17.4■□□□□ 0.38
ShbQ6PD21 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ShbQ6PD21 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ShbQ6PD21 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShbQ6PD21 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShbQ6PD21 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShbQ6PD21 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShbQ6PD21 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
ShbQ6PD21 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ShbQ6PD21 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ShbQ6PD21 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ShbQ6PD21 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Gm10253-201ENSMUST00000194270 940 ntBASIC17.39■□□□□ 0.37
ShbQ6PD21 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.39■□□□□ 0.37
ShbQ6PD21 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ShbQ6PD21 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ShbQ6PD21 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShbQ6PD21 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShbQ6PD21 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShbQ6PD21 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShbQ6PD21 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ShbQ6PD21 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShbQ6PD21 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ShbQ6PD21 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShbQ6PD21 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms