Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga7Q6DD96 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.71■□□□□ 0.1
Pcdhga7Q6DD96 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Gm11336-201ENSMUST00000118168 334 ntBASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Gm13559-201ENSMUST00000120476 863 ntBASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga7Q6DD96 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga7Q6DD96 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms