Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Gm18421-201ENSMUST00000204122 625 ntBASIC12.32□□□□□ -0.44
Zfp248Q640N4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zfp248Q640N4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.31□□□□□ -0.44
Zfp248Q640N4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zfp248Q640N4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Gm11336-201ENSMUST00000118168 334 ntBASIC12.3□□□□□ -0.44
Zfp248Q640N4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Mir1668-201ENSMUST00000184114 107 ntBASIC12.3□□□□□ -0.44
Zfp248Q640N4 Gm29707-201ENSMUST00000196325 491 ntBASIC12.3□□□□□ -0.44
Zfp248Q640N4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zfp248Q640N4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.29□□□□□ -0.44
Zfp248Q640N4 Gm13559-201ENSMUST00000120476 863 ntBASIC12.29□□□□□ -0.44
Zfp248Q640N4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Mir5130-201ENSMUST00000175160 84 ntBASIC12.29□□□□□ -0.44
Zfp248Q640N4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Dancr-204ENSMUST00000132389 2347 ntBASIC12.29□□□□□ -0.44
Zfp248Q640N4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zfp248Q640N4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms