Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.88■□□□□ 0.13
Col12a1Q60847 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.88■□□□□ 0.13
Col12a1Q60847 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.88■□□□□ 0.13
Col12a1Q60847 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.88■□□□□ 0.13
Col12a1Q60847 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col12a1Q60847 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col12a1Q60847 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.88■□□□□ 0.13
Col12a1Q60847 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.88■□□□□ 0.13
Col12a1Q60847 Gm5779-201ENSMUST00000218467 910 ntBASIC15.88■□□□□ 0.13
Col12a1Q60847 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col12a1Q60847 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.88■□□□□ 0.13
Col12a1Q60847 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col12a1Q60847 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col12a1Q60847 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col12a1Q60847 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.87■□□□□ 0.13
Col12a1Q60847 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.87■□□□□ 0.13
Col12a1Q60847 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.87■□□□□ 0.13
Col12a1Q60847 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.87■□□□□ 0.13
Col12a1Q60847 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.87■□□□□ 0.13
Col12a1Q60847 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Gm12490-201ENSMUST00000120255 560 ntBASIC15.87■□□□□ 0.13
Col12a1Q60847 Gm12151-201ENSMUST00000121374 290 ntBASIC15.87■□□□□ 0.13
Col12a1Q60847 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.87■□□□□ 0.13
Col12a1Q60847 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col12a1Q60847 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col12a1Q60847 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col12a1Q60847 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col12a1Q60847 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Col12a1Q60847 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.86■□□□□ 0.13
Col12a1Q60847 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col12a1Q60847 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Gm43433-201ENSMUST00000196573 481 ntBASIC15.86■□□□□ 0.13
Col12a1Q60847 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.86■□□□□ 0.13
Col12a1Q60847 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.86■□□□□ 0.13
Col12a1Q60847 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Col12a1Q60847 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col12a1Q60847 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.85■□□□□ 0.13
Col12a1Q60847 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col12a1Q60847 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.85■□□□□ 0.13
Col12a1Q60847 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col12a1Q60847 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.85■□□□□ 0.13
Col12a1Q60847 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col12a1Q60847 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col12a1Q60847 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Mir6404-201ENSMUST00000183699 94 ntBASIC15.85■□□□□ 0.13
Col12a1Q60847 Gm27430-201ENSMUST00000184585 107 ntBASIC15.85■□□□□ 0.13
Col12a1Q60847 Gm44333-201ENSMUST00000197168 107 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms