Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Gm18115-201ENSMUST00000221209 621 ntBASIC15.41■□□□□ 0.06
Nr1h4Q60641 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.41■□□□□ 0.06
Nr1h4Q60641 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nr1h4Q60641 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.4■□□□□ 0.06
Nr1h4Q60641 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nr1h4Q60641 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.4■□□□□ 0.06
Nr1h4Q60641 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.4■□□□□ 0.06
Nr1h4Q60641 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Gm20760-201ENSMUST00000179197 648 ntBASIC15.39■□□□□ 0.05
Nr1h4Q60641 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.39■□□□□ 0.05
Nr1h4Q60641 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nr1h4Q60641 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.38■□□□□ 0.05
Nr1h4Q60641 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nr1h4Q60641 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1h4Q60641 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1h4Q60641 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1h4Q60641 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1h4Q60641 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1h4Q60641 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1h4Q60641 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.37■□□□□ 0.05
Nr1h4Q60641 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1h4Q60641 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1h4Q60641 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms