Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Satb1Q60611 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Satb1Q60611 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Satb1Q60611 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.72■□□□□ 0.27
Satb1Q60611 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Satb1Q60611 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.72■□□□□ 0.27
Satb1Q60611 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Satb1Q60611 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Satb1Q60611 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Satb1Q60611 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Satb1Q60611 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Satb1Q60611 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Satb1Q60611 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Satb1Q60611 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Satb1Q60611 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.71■□□□□ 0.27
Satb1Q60611 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Satb1Q60611 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Satb1Q60611 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.71■□□□□ 0.27
Satb1Q60611 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.71■□□□□ 0.27
Satb1Q60611 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Satb1Q60611 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.71■□□□□ 0.27
Satb1Q60611 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Satb1Q60611 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.71■□□□□ 0.27
Satb1Q60611 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Satb1Q60611 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Satb1Q60611 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Satb1Q60611 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.71■□□□□ 0.27
Satb1Q60611 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Satb1Q60611 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Satb1Q60611 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Satb1Q60611 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Satb1Q60611 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Satb1Q60611 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.7■□□□□ 0.26
Satb1Q60611 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.7■□□□□ 0.26
Satb1Q60611 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.7■□□□□ 0.26
Satb1Q60611 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Gm15165-201ENSMUST00000118140 502 ntBASIC16.7■□□□□ 0.26
Satb1Q60611 Gm13312-201ENSMUST00000119631 718 ntBASIC16.7■□□□□ 0.26
Satb1Q60611 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.7■□□□□ 0.26
Satb1Q60611 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Satb1Q60611 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.7■□□□□ 0.26
Satb1Q60611 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.7■□□□□ 0.26
Satb1Q60611 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.7■□□□□ 0.26
Satb1Q60611 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Satb1Q60611 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Satb1Q60611 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Satb1Q60611 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.7■□□□□ 0.26
Satb1Q60611 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Satb1Q60611 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Satb1Q60611 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Satb1Q60611 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.69■□□□□ 0.26
Satb1Q60611 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Satb1Q60611 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Satb1Q60611 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Satb1Q60611 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Satb1Q60611 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms