Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Gm27397-201ENSMUST00000184997 107 ntBASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Gm44945-201ENSMUST00000206764 1187 ntBASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scaf1Q5U4C3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Gm25925-201ENSMUST00000158314 306 ntBASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf1Q5U4C3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scaf1Q5U4C3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Scaf1Q5U4C3 Gm5366-201ENSMUST00000215494 1338 ntBASIC21.02■□□□□ 0.95
Scaf1Q5U4C3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scaf1Q5U4C3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 AC158538.2-201ENSMUST00000225455 906 ntBASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.01■□□□□ 0.95
Scaf1Q5U4C3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Gm26596-201ENSMUST00000180464 2655 ntBASIC21■□□□□ 0.95
Scaf1Q5U4C3 Gm23935-201ENSMUST00000102303 57 ntBASIC21■□□□□ 0.95
Scaf1Q5U4C3 Gm24270-201ENSMUST00000102326 57 ntBASIC21■□□□□ 0.95
Scaf1Q5U4C3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Gm24245-201ENSMUST00000157318 57 ntBASIC21■□□□□ 0.95
Scaf1Q5U4C3 Gm25911-201ENSMUST00000157621 56 ntBASIC21■□□□□ 0.95
Scaf1Q5U4C3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Gm43575-201ENSMUST00000196420 516 ntBASIC21■□□□□ 0.95
Scaf1Q5U4C3 AC225888.1-201ENSMUST00000227184 728 ntBASIC21■□□□□ 0.95
Scaf1Q5U4C3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scaf1Q5U4C3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Gm7787-201ENSMUST00000216858 688 ntBASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Scaf1Q5U4C3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms