Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Gm7461-201ENSMUST00000058918 827 ntBASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav2Q5R1I9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Mir8098-201ENSMUST00000184011 137 ntBASIC12.89□□□□□ -0.35
Trav2Q5R1I9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Gm36967-201ENSMUST00000193814 266 ntBASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav2Q5R1I9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trav2Q5R1I9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.87□□□□□ -0.35
Trav2Q5R1I9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms