Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7-2Q5R1I3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Gm11539-201ENSMUST00000119837 557 ntBASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Gm13436-201ENSMUST00000120418 567 ntBASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Gm13559-201ENSMUST00000120476 863 ntBASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Mir6982-201ENSMUST00000184354 68 ntBASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav7-2Q5R1I3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav7-2Q5R1I3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms