Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Nespas-201ENSMUST00000143738 1083 ntBASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-3Q5R1C3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Gm10033-202ENSMUST00000211874 928 ntBASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav3-3Q5R1C3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms