Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 Gm44492-201ENSMUST00000197012 141 ntBASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-2Q5R1B6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav8d-2Q5R1B6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.71■□□□□ 0.1
Trav8d-2Q5R1B6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav8d-2Q5R1B6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav8d-2Q5R1B6 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.71■□□□□ 0.1
Trav8d-2Q5R1B6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav8d-2Q5R1B6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Trav8d-2Q5R1B6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Gm13616-201ENSMUST00000120600 222 ntBASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-2Q5R1B6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Gm15358-201ENSMUST00000119249 520 ntBASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms