Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim80Q3V061 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim80Q3V061 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim80Q3V061 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trim80Q3V061 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim80Q3V061 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Gm7889-201ENSMUST00000185591 958 ntBASIC16.73■□□□□ 0.27
Trim80Q3V061 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim80Q3V061 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim80Q3V061 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim80Q3V061 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trim80Q3V061 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim80Q3V061 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Trim80Q3V061 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim80Q3V061 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim80Q3V061 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim80Q3V061 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim80Q3V061 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim80Q3V061 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim80Q3V061 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trim80Q3V061 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Trim80Q3V061 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.71■□□□□ 0.27
Trim80Q3V061 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.71■□□□□ 0.27
Trim80Q3V061 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim80Q3V061 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim80Q3V061 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim80Q3V061 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim80Q3V061 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms