Protein–RNA interactions for Protein: Q3UNW5

Tfcp2l1, Transcription factor CP2-like protein 1, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tfcp2l1Q3UNW5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tfcp2l1Q3UNW5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.62■□□□□ 0.57
Tfcp2l1Q3UNW5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm25406-201ENSMUST00000157599 105 ntBASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm17271-201ENSMUST00000165535 355 ntBASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tfcp2l1Q3UNW5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tfcp2l1Q3UNW5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm11764-201ENSMUST00000120221 623 ntBASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tfcp2l1Q3UNW5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.58■□□□□ 0.57
Tfcp2l1Q3UNW5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tfcp2l1Q3UNW5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.58■□□□□ 0.56
Tfcp2l1Q3UNW5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.58■□□□□ 0.56
Tfcp2l1Q3UNW5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tfcp2l1Q3UNW5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms