Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Gm43125-201ENSMUST00000201724 730 ntBASIC19.09■□□□□ 0.65
Col5a2Q3U962 Gm20553-201ENSMUST00000204205 844 ntBASIC19.09■□□□□ 0.65
Col5a2Q3U962 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col5a2Q3U962 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col5a2Q3U962 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col5a2Q3U962 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col5a2Q3U962 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.08■□□□□ 0.64
Col5a2Q3U962 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.08■□□□□ 0.64
Col5a2Q3U962 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Col5a2Q3U962 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col5a2Q3U962 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col5a2Q3U962 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col5a2Q3U962 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Gm27301-201ENSMUST00000184012 127 ntBASIC19.07■□□□□ 0.64
Col5a2Q3U962 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col5a2Q3U962 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.06■□□□□ 0.64
Col5a2Q3U962 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.06■□□□□ 0.64
Col5a2Q3U962 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col5a2Q3U962 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.05■□□□□ 0.64
Col5a2Q3U962 Rarb-207ENSMUST00000225921 2756 ntBASIC19.05■□□□□ 0.64
Col5a2Q3U962 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Gm18889-201ENSMUST00000174284 929 ntBASIC19.05■□□□□ 0.64
Col5a2Q3U962 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.05■□□□□ 0.64
Col5a2Q3U962 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.05■□□□□ 0.64
Col5a2Q3U962 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col5a2Q3U962 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm22065-201ENSMUST00000103753 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm22066-201ENSMUST00000103761 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm24932-201ENSMUST00000103763 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm24115-201ENSMUST00000103799 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm22190-201ENSMUST00000103827 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm22191-201ENSMUST00000103831 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm24721-201ENSMUST00000103849 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm28018-201ENSMUST00000103869 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm26399-201ENSMUST00000103937 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm25349-201ENSMUST00000177728 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm23616-201ENSMUST00000177797 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm25871-201ENSMUST00000177816 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm24752-201ENSMUST00000178240 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm24496-201ENSMUST00000178287 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm25649-201ENSMUST00000178476 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm25548-201ENSMUST00000178681 110 ntBASIC19.04■□□□□ 0.64
Col5a2Q3U962 Gm23147-201ENSMUST00000178841 110 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms