Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.79■□□□□ 0.44
Hmgb1P63158 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hmgb1P63158 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgb1P63158 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hmgb1P63158 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Hmgb1P63158 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.78■□□□□ 0.44
Hmgb1P63158 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.78■□□□□ 0.44
Hmgb1P63158 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmgb1P63158 Gm43799-201ENSMUST00000201845 579 ntBASIC17.78■□□□□ 0.44
Hmgb1P63158 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmgb1P63158 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmgb1P63158 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Hmgb1P63158 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Hmgb1P63158 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmgb1P63158 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgb1P63158 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgb1P63158 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgb1P63158 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgb1P63158 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.77■□□□□ 0.44
Hmgb1P63158 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Hmgb1P63158 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgb1P63158 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgb1P63158 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgb1P63158 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgb1P63158 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.77■□□□□ 0.44
Hmgb1P63158 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hmgb1P63158 Gm27389-201ENSMUST00000183622 195 ntBASIC17.77■□□□□ 0.44
Hmgb1P63158 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Hmgb1P63158 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.77■□□□□ 0.44
Hmgb1P63158 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.77■□□□□ 0.44
Hmgb1P63158 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.77■□□□□ 0.44
Hmgb1P63158 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hmgb1P63158 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgb1P63158 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.77■□□□□ 0.44
Hmgb1P63158 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgb1P63158 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgb1P63158 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Hmgb1P63158 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgb1P63158 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgb1P63158 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgb1P63158 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgb1P63158 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.76■□□□□ 0.43
Hmgb1P63158 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgb1P63158 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb1P63158 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb1P63158 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb1P63158 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hmgb1P63158 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hmgb1P63158 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb1P63158 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb1P63158 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hmgb1P63158 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb1P63158 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.75■□□□□ 0.43
Hmgb1P63158 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms