Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Cks1bP61025 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.56□□□□□ -0.56
Cks1bP61025 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.56□□□□□ -0.56
Cks1bP61025 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.56□□□□□ -0.56
Cks1bP61025 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Gm13216-201ENSMUST00000117145 591 ntBASIC11.56□□□□□ -0.56
Cks1bP61025 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.56□□□□□ -0.56
Cks1bP61025 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cks1bP61025 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.56□□□□□ -0.56
Cks1bP61025 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.56□□□□□ -0.56
Cks1bP61025 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Gm5874-201ENSMUST00000096101 508 ntBASIC11.56□□□□□ -0.56
Cks1bP61025 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Cks1bP61025 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cks1bP61025 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cks1bP61025 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.55□□□□□ -0.56
Cks1bP61025 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.55□□□□□ -0.56
Cks1bP61025 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cks1bP61025 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.55□□□□□ -0.56
Cks1bP61025 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.55□□□□□ -0.56
Cks1bP61025 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Cks1bP61025 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cks1bP61025 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cks1bP61025 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cks1bP61025 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cks1bP61025 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cks1bP61025 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.54□□□□□ -0.56
Cks1bP61025 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cks1bP61025 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Gm6211-202ENSMUST00000167849 925 ntBASIC11.54□□□□□ -0.56
Cks1bP61025 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.54□□□□□ -0.56
Cks1bP61025 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
Cks1bP61025 Gm44549-201ENSMUST00000208351 577 ntBASIC11.54□□□□□ -0.56
Cks1bP61025 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.54□□□□□ -0.56
Cks1bP61025 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Cks1bP61025 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms