Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm11620-201ENSMUST00000118770 1845 ntBASIC17■□□□□ 0.31
NcanP55066 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17■□□□□ 0.31
NcanP55066 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.99■□□□□ 0.31
NcanP55066 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
NcanP55066 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NcanP55066 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NcanP55066 Mir449b-201ENSMUST00000104833 80 ntBASIC16.99■□□□□ 0.31
NcanP55066 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.99■□□□□ 0.31
NcanP55066 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NcanP55066 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.99■□□□□ 0.31
NcanP55066 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NcanP55066 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NcanP55066 Gm7653-201ENSMUST00000214567 508 ntBASIC16.99■□□□□ 0.31
NcanP55066 Gm7787-201ENSMUST00000216858 688 ntBASIC16.99■□□□□ 0.31
NcanP55066 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.99■□□□□ 0.31
NcanP55066 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NcanP55066 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NcanP55066 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.99■□□□□ 0.31
NcanP55066 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NcanP55066 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NcanP55066 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NcanP55066 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NcanP55066 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.98■□□□□ 0.31
NcanP55066 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NcanP55066 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NcanP55066 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.98■□□□□ 0.31
NcanP55066 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.98■□□□□ 0.31
NcanP55066 Gm27301-201ENSMUST00000184012 127 ntBASIC16.98■□□□□ 0.31
NcanP55066 Gm6007-201ENSMUST00000208170 823 ntBASIC16.98■□□□□ 0.31
NcanP55066 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.98■□□□□ 0.31
NcanP55066 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.98■□□□□ 0.31
NcanP55066 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.98■□□□□ 0.31
NcanP55066 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Gm9899-201ENSMUST00000065519 555 ntBASIC16.98■□□□□ 0.31
NcanP55066 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.98■□□□□ 0.31
NcanP55066 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NcanP55066 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.97■□□□□ 0.31
NcanP55066 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NcanP55066 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.97■□□□□ 0.31
NcanP55066 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NcanP55066 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NcanP55066 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.97■□□□□ 0.31
NcanP55066 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NcanP55066 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NcanP55066 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.97■□□□□ 0.31
NcanP55066 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.97■□□□□ 0.31
NcanP55066 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.97■□□□□ 0.31
NcanP55066 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
NcanP55066 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NcanP55066 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NcanP55066 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NcanP55066 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NcanP55066 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NcanP55066 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NcanP55066 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NcanP55066 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NcanP55066 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.96■□□□□ 0.31
NcanP55066 Gm15358-201ENSMUST00000119249 520 ntBASIC16.96■□□□□ 0.31
NcanP55066 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.96■□□□□ 0.31
NcanP55066 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.96■□□□□ 0.31
NcanP55066 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.96■□□□□ 0.31
NcanP55066 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.96■□□□□ 0.31
NcanP55066 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NcanP55066 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NcanP55066 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
NcanP55066 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NcanP55066 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
NcanP55066 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NcanP55066 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.96■□□□□ 0.3
NcanP55066 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
NcanP55066 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NcanP55066 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NcanP55066 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.95■□□□□ 0.3
NcanP55066 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms