Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pdx1P52946 Gm45412-201ENSMUST00000210217 2275 ntBASIC16■□□□□ 0.15
Pdx1P52946 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16■□□□□ 0.15
Pdx1P52946 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pdx1P52946 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16■□□□□ 0.15
Pdx1P52946 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pdx1P52946 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pdx1P52946 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pdx1P52946 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pdx1P52946 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pdx1P52946 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.99■□□□□ 0.15
Pdx1P52946 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdx1P52946 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.98■□□□□ 0.15
Pdx1P52946 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Gm14859-201ENSMUST00000117752 357 ntBASIC15.98■□□□□ 0.15
Pdx1P52946 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.98■□□□□ 0.15
Pdx1P52946 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.98■□□□□ 0.15
Pdx1P52946 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pdx1P52946 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdx1P52946 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Pdx1P52946 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pdx1P52946 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pdx1P52946 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.97■□□□□ 0.15
Pdx1P52946 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdx1P52946 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdx1P52946 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.97■□□□□ 0.15
Pdx1P52946 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdx1P52946 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.96■□□□□ 0.15
Pdx1P52946 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdx1P52946 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdx1P52946 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pdx1P52946 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdx1P52946 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pdx1P52946 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdx1P52946 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdx1P52946 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdx1P52946 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdx1P52946 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdx1P52946 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms